Restriction Digest: Difference between revisions

From Heit Lab Wiki
Jump to navigation Jump to search
(Created page with " Protocol 1. Check the NEB (or other supplier) website to confirm enzyme compatibility 2. In a PCR tube add the reaction components according to the table listed below 3. Incubate at 37°C for 30 min if time-saver qualified, 60 minutes if not Example Reaction Component Volume ddH2O Up to 50 µL 10X rCutSmart Buffer 5 µL DNA x (1 µg) Enzyme 1 1 µL Enzyme 2 1 µL Notes - NEB High-Fidelity (HF) enzymes are ordered whenever possible, they all use rCutSmart reactio...")
 
No edit summary
 
Line 1: Line 1:


Protocol  
'''Protocol'''
1. Check the NEB (or other supplier) website to confirm enzyme compatibility
2.  In a PCR tube add the reaction components according to the table listed below
3.  Incubate at 37°C for 30 min if time-saver qualified, 60 minutes if not


Example Reaction
# Check the NEB (or other supplier) website to confirm enzyme compatibility
# In a PCR tube add the reaction components according to the table listed below
# Mix reaction gently and spin down briefly with benchtop centrifuge
# Incubate at 37°C for 30 min if time-saver qualified, 60 minutes if not


Component Volume
ddH2O Up to 50 µL
10X rCutSmart Buffer 5 µL
DNA x (1 µg)
Enzyme 1 1 µL
Enzyme 2 1 µL


Notes
'''Example Reaction'''
- NEB High-Fidelity (HF) enzymes are ordered whenever possible, they all use rCutSmart reaction buffer and are usually time-saver qualified Hi
{| class="wikitable"
- NEB has the option to select your specific enzymes and generate a detailed protocol
|'''Component'''
|'''Volume'''
|-
|ddH2O
|Up to 50 µL
|-
|10X rCutSmart Buffer
|5 µL
|-
|DNA
|x (1 µg)
|-
|Enzyme 1
|1 µL
|-
|Enzyme 2
|1 µL
|}
 
'''Notes'''
 
- NEB High-Fidelity (HF) enzymes are ordered whenever possible, they all use rCutSmart reaction buffer and are usually time-saver qualified
 
- NEB has the option to select your specific enzymes and generate a detailed protocol
- Heat inactivation may be recommended if there are additional steps in the workflow without a DNA purification step
- Heat inactivation may be recommended if there are additional steps in the workflow without a DNA purification step


References, related resources, and acknowledgments
 
- https://nebcloner.neb.com/#!/redigest
'''References, related resources, and acknowledgments'''
 
https://nebcloner.neb.com/#!/redigest

Latest revision as of 18:56, 17 January 2025

Protocol

  1. Check the NEB (or other supplier) website to confirm enzyme compatibility
  2. In a PCR tube add the reaction components according to the table listed below
  3. Mix reaction gently and spin down briefly with benchtop centrifuge
  4. Incubate at 37°C for 30 min if time-saver qualified, 60 minutes if not


Example Reaction

Component Volume
ddH2O Up to 50 µL
10X rCutSmart Buffer 5 µL
DNA x (1 µg)
Enzyme 1 1 µL
Enzyme 2 1 µL

Notes

- NEB High-Fidelity (HF) enzymes are ordered whenever possible, they all use rCutSmart reaction buffer and are usually time-saver qualified

- NEB has the option to select your specific enzymes and generate a detailed protocol - Heat inactivation may be recommended if there are additional steps in the workflow without a DNA purification step


References, related resources, and acknowledgments

https://nebcloner.neb.com/#!/redigest